Case-Control Breast Cancer Study of MALDI-TOF Proteomic Mass Spectrometry Data on Serum Samples

Martijn P. J. van der Werff, Leiden University Medical Center
Bart Mertens, Leiden University Medical Center
Mirre E. de Noo, Leiden University Medical Center
Marco R. Bladergroen, Leiden University Medical Center
Hans C. Dalebout, Leiden University Medical Center
Rob A. E. M. Tollenaar, Leiden University Medical Center
Andre M. Deelder, Leiden University Medical Center

Abstract

We introduce mass spectrometry proteomic research for diagnosis from a clinical perspective, with special reference to early-stage breast cancer detection. The nature of SELDI and MALDI mass spectrometric measurement is discussed. We explain how the mass spectral data arising from this technology may be viewed as a new data type. Some of the properties of the data are discussed and we show how such spectra may be interpreted. Sample preprocessing for mass spectrometry is introduced and a literature review of research in clinical proteomics is presented. Finally, we provide a detailed description of the study design on the breast cancer case-control study which is investigated in this special issue.

Submitted: January 18, 2008 · Accepted: January 23, 2008 · Published: January 25, 2008

Recommended Citation

van der Werff, Martijn P. J.; Mertens, Bart; de Noo, Mirre E.; Bladergroen, Marco R.; Dalebout, Hans C.; Tollenaar, Rob A. E. M.; and Deelder, Andre M. (2008) "Case-Control Breast Cancer Study of MALDI-TOF Proteomic Mass Spectrometry Data on Serum Samples," Statistical Applications in Genetics and Molecular Biology: Vol. 7 : Iss. 2, Article 2.
DOI: 10.2202/1544-6115.1352
Available at: http://www.bepress.com/sagmb/vol7/iss2/art2

 
 
 
 

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