Articles
Coalescent Time Distributions in Trees of Arbitrary Size
Sam Efromovich and Laura Salter Kubatko
Quantifying the Association between Gene Expressions and DNA-Markers by Penalized Canonical Correlation Analysis
Sandra Waaijenborg, Philip C. Verselewel de Witt Hamer, and Aeilko H. Zwinderman
Nonparametric Functional Mapping of Quantitative Trait Loci Underlying Programmed Cell Death
Yuehua Cui, Rongling Wu, George Casella, and Jun Zhu
Accommodating Uncertainty in a Tree Set for Function Estimation
Brian C. Healy, Victor G. DeGruttola, and Chengcheng Hu
Comparing the Characteristics of Gene Expression Profiles Derived by Univariate and Multivariate Classification Methods
Manuela Zucknick, Sylvia Richardson, and Euan A. Stronach
Calculating Confidence Intervals for Prediction Error in Microarray Classification Using Resampling
Wenyu Jiang, Sudhir Varma, and Richard Simon
Structure Learning in Nested Effects Models
Achim Tresch and Florian Markowetz
Correcting the Estimated Level of Differential Expression for Gene Selection Bias: Application to a Microarray Study
David R. Bickel
Adapting Prediction Error Estimates for Biased Complexity Selection in High-Dimensional Bootstrap Samples
Harald Binder and Martin Schumacher
Adaptive Choice of the Number of Bootstrap Samples in Large Scale Multiple Testing
Wenge Guo and Shyamal Peddada
Re-Cracking the Nucleosome Positioning Code
Mark R. Segal
Semi-Parametric Differential Expression Analysis via Partial Mixture Estimation
David Rossell, Rudy Guerra, and Clayton Scott
A SNP Streak Model for the Identification of Genetic Regions Identical-by-descent
Gregory Leibon, Daniel N. Rockmore, and Martin R. Pollak
Software Communications
TRAB: Testing Whether Mutation Frequencies Are Above an Unknown Background
Giovanni Parmigiani, Sining Chen, and Victor E. Velculescu